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All MAFs on this page encapsulate Legacy TCGA exome samples called against HG19.  At present we do not serve whole genome or HG38 MAFs. Sample counts reflect the source MAFs prior to Firehose ingest; the counts may be reduced during ingest & processing, due to redactions, blacklisting, et cetera.


The final counts of samples ingested into Firehose are given in our sample reports.

MAFs Ingested into Broad GDAC Firehose as of 10 March 2016
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MAFs Ingested into Broad GDAC Firehose