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Showing 1-10 of 41 for "Andrew Cherniack" "achernia@broadinstitute.org"

  • [GDAC-users] Re: Number of cases missing for mRNAseq in BRCA

    : Mon, 19 Oct 2015 10:17:34 0400 From: Andrew Cherniack <achernia@broadinstitute.org> ReplyTo: achernia@broadinstitute.org To: Michael Noble … ://gdac.broadinstitute.org/> (as > shown below). > > Hope this helps, > Mike > > > > > On Oct 19, 2015, at 9:58 AM, Andrew Cherniack <achernia@broadinstitute.org> > wrote
  • Re: [GDAC-users] Number of cases missing for mRNAseq in BRCA

    : Mon, 19 Oct 2015 18:02:53 0400 From: Andrew Cherniack <achernia@broadinstitute.org> ReplyTo: achernia@broadinstitute.org To: Michael Noble … <lgraz@broadinstitute.org> or 6177147390) > > On Mon, Oct 19, 2015 at 10:17 AM, Andrew Cherniack < > achernia@broadinstitute.org> wrote: > >> Yes I understand
  • [GDAC-users] Re: Number of cases missing for mRNAseq in BRCA

    : Mon, 19 Oct 2015 09:58:30 0400 From: Andrew Cherniack <achernia@broadinstitute.org> ReplyTo: achernia@broadinstitute.org To: "gdac@broadinstitute.org … at 9:56 AM, Andrew Cherniack < achernia@broadinstitute.org> wrote: > Why are half of the RNA seq cases missing in FireBrowse for BRCA. > I am working
  • [GDAC-users] synchronizing and genepattern GISTIIC

    : Wed, 30 Jul 2014 00:03:39 0400 From: Andrew Cherniack <achernia@broadinstitute.org> ReplyTo: achernia@broadinstitute.org To: "gdac@broadinstitute.org … and a real impediment to research. It doesn't seem like this should be real hard to do. Regards, Andy Andrew Cherniack, PhD Group Leader Cancer Program Broad Institute
  • [GDAC-users] firehose access to Juliann Shih

    : Tue, 5 Aug 2014 16:42:37 0400 From: Andrew Cherniack <achernia@broadinstitute.org> ReplyTo: achernia@broadinstitute.org To: "gdac@broadinstitute.org … access. Andy Andrew Cherniack, PhD Group Leader Cancer Program Broad Institute of Harvard and MIT 7 Cambridge Center Cambridge, Mass 02142 email
  • [GDAC-users] python error when trying to create a new gdac firehose awg workspace.

    : Sun, 15 Feb 2015 21:12:22 0500 From: Andrew Cherniack <achernia@broadinstitute.org> ReplyTo: achernia@broadinstitute.org To: "gdac@broadinstitute.org … : newline character seen in unquoted field do you need to open the file in universalnewline mode? Does anyone know how to fix this? Andy Andrew Cherniack, PhD
  • [GDAC-users] confusion exon level expression data in firehose.

    : Thu, 1 Oct 2015 11:48:01 0400 From: Andrew Cherniack <achernia@broadinstitute.org> ReplyTo: achernia@broadinstitute.org To: "gdac@broadinstitute.org … TCGAEOA3KW01A). This is all very confusing. Regards, Andy Andrew Cherniack, PhD Group Leader Cancer Program Broad Institute of Harvard and MIT 415 Main Street
  • [GDAC-users] Is the gdac server done?

    : Fri, 26 Jun 2015 13:49:21 0400 From: Andrew Cherniack <achernia@broadinstitute.org> ReplyTo: achernia@broadinstitute.org To: "gdac@broadinstitute.org … of achernia@broadinstitute.org designates 209.85.213.178 as permitted sender) clientip=209.85.213.178; AuthenticationResults: mx.google.com; spf=pass (google.com
  • Re: Help with GISTIC 2 CNV file

    Mar 2012 13:10:41 0400 From: Andrew Cherniack <achernia@broadinstitute.org> ReplyTo: achernia@broadinstitute.org To: sol23@pitt.edu Cc … you are looking at you may be using an older or newer version of GISTIC= . Regards, Andy Andrew Cherniack, PhD Research Scientist II Broad Institute 7
  • [GDAC-users] Fwd: Broad Institute MutSig 1.5

    : Thu, 6 Nov 2014 08:06:38 0500 From: Andrew Cherniack <achernia@broadinstitute.org> ReplyTo: achernia@broadinstitute.org To: "gdac@broadinstitute.org … ) ReceivedSPF: pass (google.com: domain of achernia@broadinstitute.org designates 74.125.82.52 as permitted sender) clientip=74.125.82.52; AuthenticationResults