Re: [GDAC-users] Re: Number of cases missing for mRNAseq in BRCA

Subject:   Re: [GDAC-users] Re: Number of cases missing for mRNAseq in BRCA (find more)
From:   Hailei Zhang <hidden> (find more)
Date:   Oct 19, 2015 10:02

Hi Andy,
 
You are right. We did not have pipeline to merge RNAseq data and microarray
data.
 
Best,
Hailei
 
On Mon, Oct 19, 2015 at 9:58 AM, Andrew Cherniack <
hidden> wrote:
 
> Never mind I just figured it out.
> You guys should label mRNA  - mRNA microarray to keep it distinguished
> from RNAseq.
>
> Andy
>
> ___________________________
> Andrew Cherniack, PhD
> Group Leader
> Cancer Program
> Broad Institute of Harvard and MIT
> 415 Main Street
> Cambridge, Mass 02142
> email: hidden
> ___________________________
>
> On Mon, Oct 19, 2015 at 9:56 AM, Andrew Cherniack <
> hidden> wrote:
>
>> Why are half of the RNA seq cases missing in FireBrowse for BRCA.
>> I am working with the BRCA group and I know that ~1000 cases have been
>> profiled.
>>
>> Andy
>>
>
>
 
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